Gene: COL.COLO4_11578

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_11578
  • Transcript Identifier COL.rna10371
  • Gene Type Coding gene
  • Location AWUE01014716.1 : 8644-11864 : negative

Gene Family Information

  • ID HOM05D003401
  • #Genes/#Species 201/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna10371
  • GenBank OMP01793.1
  • id gene11550
  • gene_name COLO4_11578
  • uniprot A0A1R3K3Z3

Descriptions

  • Description Glycoside hydrolase, family 43
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010406
ISO
PLAZA Integrative Orthologyclassical arabinogalactan protein metabolic process AT5G67540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565
ISO
PLAZA Integrative Orthologybeta-galactosidase activity AT5G67540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G67540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006710 Glycoside hydrolase, family 43
IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily
Mapman id Description
21.2.5.2.1 Cell wall organisation.hemicellulose.arabinogalactan.modification.beta-1,3-galactosidase (GH43)