Gene: COL.COLO4_10549

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_10549
  • Transcript Identifier COL.rna9344
  • Gene Type Coding gene
  • Location AWUE01014528.1 : 18738-25787 : positive

Gene Family Information

  • ID HOM05D000031
  • #Genes/#Species 5385/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna9344
  • GenBank OMP03252.1
  • id gene10521
  • gene_name COLO4_10549
  • uniprot A0A1R3K845

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
ISO
PLAZA Integrative Orthologytranslation AT3G05590
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IEA
InterProprotein phosphorylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G27850
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT5G27850
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G05590
GO:0030247
IEA
GOA Databasepolysaccharide binding
GO:0030247
IEA
InterPropolysaccharide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G05590
GO:0015934
ISO
PLAZA Integrative Orthologylarge ribosomal subunit AT3G05590
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G27850
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G27850
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G05590
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G05590
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G27850
GO:0005840
IEA
GOA Databaseribosome
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT5G27850
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT5G27850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036227 Ribosomal L18e/L15P superfamily
IPR000719 Protein kinase domain
IPR025287 Wall-associated receptor kinase, galacturonan-binding domain
IPR011009 Protein kinase-like domain superfamily
IPR021131 Ribosomal protein L18e/L15P
Mapman id Description
17.1.2.1.18 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL18
18.4.1.25 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (WAK/WAKL)