Gene: COL.COLO4_07506

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_07506
  • Transcript Identifier COL.rna6315
  • Gene Type Coding gene
  • Location AWUE01013335.1 : 12450-16941 : negative

Gene Family Information

  • ID HOM05D002196
  • #Genes/#Species 306/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna6315
  • GenBank OMP07249.1
  • id gene7478
  • gene_name COLO4_07506
  • uniprot A0A1R3KJL6

Descriptions

  • Description Zinc finger, GATA-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G17570

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028020 ASX, DEUBAD domain
IPR000679 Zinc finger, GATA-type
IPR044589 GATA transcription factor 26/27
IPR038108 RPN13, DEUBAD domain superfamily
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.3 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (D-GATA)