Gene: CARHR039810

General Information

Structural Information

Species Cardamine hirsuta
Gene Identifier CARHR039810
Transcript Identifier CARHR039810.1
Gene Type Coding gene
Location Chr1 : 23207016-23210055 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000428
#Genes/#Species 1201/100
Phylogenetic origin

ID ORTHO05D000582
#Genes/#Species 762/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid CARHR039810.1

Descriptions

Short descriptions
Ortholog descriptions

Description Polyadenylate-binding protein, putative

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT1G49760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	InterPro	RNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G49760
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G49760

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G49760

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000504	RNA recognition motif domain
IPR003954	RNA recognition motif domain, eukaryote
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR036053	PABC (PABP) domain
IPR035979	RNA-binding domain superfamily

Mapman id	Description
17.4.2.5	Protein biosynthesis.translation initiation.mRNA loading.mRNA poly-A-tail binding factor (PABP)