Gene: C03p86460
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C03p86460
- Transcript Identifier C03p86460
- Gene Type Coding gene
- Location C03 : 68338098-68340891 : positive
Gene Family Information
- ID HOM05D002023
- #Genes/#Species 327/100
- Phylogenetic origin
- ID ORTHO05D002049
- #Genes/#Species 323/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C03p86460.1_BnaDAR
- v5 BnaC03g66430D
- single_cell_id C03p86460.1-BnaDAR
- ensembl GSBRNA2T00040071001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009058 | IEA | InterPro | biosynthetic process | |
| GO:0009089 | ISO | PLAZA Integrative Orthology | lysine biosynthetic process via diaminopimelate | AT4G33680 |
| GO:0009862 | ISO | PLAZA Integrative Orthology | systemic acquired resistance, salicylic acid mediated signaling pathway | AT4G33680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008483 | IEA | InterPro | transaminase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0010285 | ISO | PLAZA Integrative Orthology | L,L-diaminopimelate aminotransferase activity | AT4G33680 |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT4G33680 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G33680 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G33680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019942 | LL-diaminopimelate aminotransferase/aminotransferase ALD1 |
| IPR004839 | Aminotransferase, class I/classII |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| Mapman id | Description |
|---|---|
| 4.1.2.2.3.3 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.LL-diaminopimelate aminotransferase |