Gene: C03p56960
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C03p56960
- Transcript Identifier C03p56960
- Gene Type Coding gene
- Location C03 : 36158012-36161468 : negative
Gene Family Information
- ID HOM05D002765
- #Genes/#Species 250/99
- Phylogenetic origin
- ID ORTHO05D003083
- #Genes/#Species 245/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C03p56960.1_BnaDAR
- v5 BnaC03g46190D
- single_cell_id C03p56960.1-BnaDAR
- ensembl GSBRNA2T00150111001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006231 | IEA | InterPro | dTMP biosynthetic process | |
| GO:0046654 | IEA | InterPro | tetrahydrofolate biosynthetic process | |
| GO:0006730 | IEA | InterPro | one-carbon metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004799 | IEA | InterPro | thymidylate synthase activity | |
| GO:0004146 | IEA | InterPro | dihydrofolate reductase activity | |
| GO:0016741 | IEA | InterPro | transferase activity, transferring one-carbon groups | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G16370 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G16370 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G16370 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023451 | Thymidylate synthase/dCMP hydroxymethylase domain |
| IPR004977 | Ribosomal protein S25 |
| IPR000398 | Thymidylate synthase |
| IPR001796 | Dihydrofolate reductase domain |
| IPR024072 | Dihydrofolate reductase-like domain superfamily |
| IPR045097 | Thymidylate synthase/dCMP hydroxymethylase |
| IPR036926 | Thymidylate synthase/dCMP hydroxymethylase superfamily |
| IPR012262 | Bifunctional dihydrofolate reductase/thymidylate synthase |
| Mapman id | Description |
|---|---|
| 17.1.3.1.26 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS25 |
| 6.3.1.2 | Nucleotide metabolism.deoxynucleotides.biosynthesis.thymidylate synthase |
| 7.5.5 | Coenzyme metabolism.tetrahydrofolate metabolism.dihydrofolate reductase |