Gene: C03p09650
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C03p09650
- Transcript Identifier C03p09650
- Gene Type Coding gene
- Location C03 : 4594599-4638027 : positive
Gene Family Information
- ID HOM05D001138
- #Genes/#Species 543/97
- Phylogenetic origin
- ID ORTHO05D006310
- #Genes/#Species 144/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid C03p09650.1_BnaDAR
- v5 BnaC03g08450D
- single_cell_id C03p09650.1-BnaDAR
- ensembl GSBRNA2T00140638001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019752 | IEA | InterPro | carboxylic acid metabolic process | |
| GO:0090063 | ISO | PLAZA Integrative Orthology | positive regulation of microtubule nucleation | AT5G17410 |
| GO:0033566 | ISO | PLAZA Integrative Orthology | gamma-tubulin complex localization | AT5G17410 |
| GO:0048229 | ISO | PLAZA Integrative Orthology | gametophyte development | AT5G17410 |
| GO:0007020 | IEA | InterPro | microtubule nucleation | |
| GO:0000226 | IEA | InterPro | microtubule cytoskeleton organization | |
| GO:0006536 | IEA | InterPro | glutamate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G17410 |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016830 | IEA | InterPro | carbon-carbon lyase activity | |
| GO:0043015 | IEA | InterPro | gamma-tubulin binding | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0004351 | IEA | InterPro | glutamate decarboxylase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055028 | ISO | PLAZA Integrative Orthology | cortical microtubule | AT5G17410 |
| GO:0000930 | ISO | PLAZA Integrative Orthology | gamma-tubulin complex | AT5G17410 |
| GO:0005938 | ISO | PLAZA Integrative Orthology | cell cortex | AT5G17410 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G17410 |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT5G17410 |
| GO:0005815 | IEA | InterPro | microtubule organizing center | |
| GO:0000922 | IEA | InterPro | spindle pole |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041470 | Gamma tubulin complex component protein, N-terminal |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR042241 | Gamma-tubulin complex, C-terminal domain superfamily |
| IPR010107 | Glutamate decarboxylase |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR007259 | Gamma-tubulin complex component protein |
| IPR040457 | Gamma tubulin complex component, C-terminal |
| IPR025322 | Protein of unknown function DUF4228, plant |
| IPR002129 | Pyridoxal phosphate-dependent decarboxylase |
| Mapman id | Description |
|---|---|
| 20.1.2.1.2 | Cytoskeleton organisation.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin Ring Complex (gamma-TuRC).component GCP2 |
| 4.1.1.1.3.1 | Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.gamma-aminobutyrate (GABA).glutamate decarboxylase |