Gene: BcaC09g51444
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC09g51444
- Transcript Identifier BcaC09g51444
- Gene Type Coding gene
- Location ChrC09 : 43213027-43218950 : negative
Gene Family Information
- ID HOM05D001165
- #Genes/#Species 531/98
- Phylogenetic origin
- ID ORTHO05D001347
- #Genes/#Species 426/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090116 | IEA | InterPro | C-5 methylation of cytosine | |
| GO:0034605 | ISO | PLAZA Integrative Orthology | cellular response to heat | AT4G19020 |
| GO:0010426 | ISO | PLAZA Integrative Orthology | DNA methylation on cytosine within a CHH sequence | AT4G19020 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0003886 | IEA | InterPro | DNA (cytosine-5-)-methyltransferase activity | |
| GO:0003682 | IEA | InterPro | chromatin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001525 | C-5 cytosine methyltransferase |
| IPR017198 | DNA (cytosine-5)-methyltransferase 1-like |
| IPR001025 | Bromo adjacent homology (BAH) domain |
| IPR016197 | Chromo-like domain superfamily |
| IPR043151 | Bromo adjacent homology (BAH) domain superfamily |
| IPR000953 | Chromo/chromo shadow domain |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR023780 | Chromo domain |
| Mapman id | Description |
|---|---|
| 12.5.2.4 | Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT) |