Gene: AT4G19020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G19020
  • Transcript Identifier AT4G19020.2
  • Gene Type Coding gene
  • Location Chr4 : 10414526-10420936 : positive

Gene Family Information

  • ID HOM05D001165
  • #Genes/#Species 531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G19020.2
  • symbol CMT2
  • uniprot Q94F87

Descriptions

  • Description chromomethylase 2
  • Computational description chromomethylase 2 (CMT2); FUNCTIONS IN: chromatin binding, DNA binding; INVOLVED IN: chromatin assembly or disassembly, DNA methylation; LOCATED IN: chromatin, nucleus; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 3 (TAIR:AT1G69770.1); Has 5135 Blast hits to 4403 proteins in 1000 species: Archae - 207; Bacteria - 2602; Metazoa - 790; Fungi - 215; Plants - 463; Viruses - 25; Other Eukaryotes - 833 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
GOA Databasechromatin organization
GO:0090116
IEA
Gene OntologyC-5 methylation of cytosine
GO:0090116
IEA
InterProC-5 methylation of cytosine
GO:0032259
IEA
GOA Databasemethylation
GO:0034605
IMP
Gene Ontologycellular response to heat1
GO:0010426
IMP
Gene OntologyDNA methylation on cytosine within a CHH sequence1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003886
IMP
IEA
Gene OntologyDNA (cytosine-5-)-methyltransferase activity1
GO:0003886
IEA
InterProDNA (cytosine-5-)-methyltransferase activity
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001525 C-5 cytosine methyltransferase
IPR001025 Bromo adjacent homology (BAH) domain
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR023780 Chromo domain
IPR017198 DNA (cytosine-5)-methyltransferase 1-like
IPR000953 Chromo/chromo shadow domain
IPR016197 Chromo-like domain superfamily
Mapman id Description
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT)