Gene: Ah.15g095160

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.15g095160
  • Transcript Identifier Ah.15g095160-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_15 : 6688146-6695983 : negative

Gene Family Information

  • ID HOM05D001722
  • #Genes/#Species 376/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.15g095160-v1.1.a1

Descriptions

  • Description Oligouridylate-binding protein 1B (AtUBP1b) (Polyuridylate-binding protein UBP1B) (Poly(U)-binding protein UBP1B)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034063
ISO
PLAZA Integrative Orthologystress granule assembly AT3G14100
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT3G14100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G54080
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G14100

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G14100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G14100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.3 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (UBP1)