Gene: Ah.15g091770
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.15g091770
- Transcript Identifier Ah.15g091770-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_15 : 2293948-2300273 : negative
Gene Family Information
- ID HOM05D000416
- #Genes/#Species 1223/93
- Phylogenetic origin
- ID ORTHO05D003584
- #Genes/#Species 214/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.15g091770-v1.1.a1
Descriptions
- Description Small nuclear ribonucleoprotein SmD1b (AtSmD1-b)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000387 | IEA | InterPro | spliceosomal snRNP assembly | |
| GO:0006508 | IEA | InterPro | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004190 | IEA | InterPro | aspartic-type endopeptidase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR001163 | LSM domain, eukaryotic/archaea-type |
| IPR034102 | Small nuclear ribonucleoprotein D1 |
| IPR032861 | Xylanase inhibitor, N-terminal |
| IPR010920 | LSM domain superfamily |
| IPR001461 | Aspartic peptidase A1 family |
| IPR032799 | Xylanase inhibitor, C-terminal |
| Mapman id | Description |
|---|---|
| 16.2.2.2 | RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-D1 |