Gene: Ah.12g052970
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.12g052970
- Transcript Identifier Ah.12g052970-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_12 : 1699206-1718313 : positive
Gene Family Information
- ID HOM05D003472
- #Genes/#Species 196/99
- Phylogenetic origin
- ID ORTHO05D007906
- #Genes/#Species 125/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.12g052970-v1.1.a1
Descriptions
- Description ABC transporter F family member 3 (ABC transporter ABCF.3) (AtABCF3) (GCN20-type ATP-binding cassette protein GCN3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005991 | IEA | InterPro | trehalose metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G64550 |
| GO:0005993 | ISO | PLAZA Integrative Orthology | trehalose catabolic process | AT4G24040 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G64550 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004555 | IEA | InterPro | alpha,alpha-trehalase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G64550 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G24040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR032781 | ABC-transporter extension domain |
| IPR001661 | Glycoside hydrolase, family 37 |
| IPR012341 | Six-hairpin glycosidase-like superfamily |
| IPR003593 | AAA+ ATPase domain |
| IPR008928 | Six-hairpin glycosidase superfamily |
| Mapman id | Description |
|---|---|
| 17.4.1.2.7 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF2 Met-tRNA binding factor activity.eIF2-alpha kinase regulator (GCN20) |
| 3.3.3 | Carbohydrate metabolism.trehalose metabolism.trehalase |