Gene: Ah.11g050030
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.11g050030
- Transcript Identifier Ah.11g050030-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_11 : 20650867-20654943 : positive
Gene Family Information
- ID HOM05D003408
- #Genes/#Species 201/99
- Phylogenetic origin
- ID ORTHO05D003949
- #Genes/#Species 197/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Ah.11g050030-v1.1.a1
Descriptions
- Description Tryptophan synthase alpha chain, chloroplastic (EC 4.2.1.20) (Indole-3-glycerol-phosphate lyase, chloroplastic) (EC 4.1.2.8) (Protein TRYPTOPHAN-REQUIRING 3)
- note Tryptophan synthase alpha chain, chloroplastic (EC 4.2.1.20) (Indole-3-glycerol-phosphate lyase, chloroplastic) (EC 4.1.2.8) (Protein TRYPTOPHAN-REQUIRING 3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006568 | IEA | InterPro | tryptophan metabolic process | |
| GO:0052544 | ISO | PLAZA Integrative Orthology | defense response by callose deposition in cell wall | AT3G54640 |
| GO:0000162 | ISO | PLAZA Integrative Orthology | tryptophan biosynthetic process | AT4G02610 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT3G54640 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G54640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004834 | IEA | InterPro | tryptophan synthase activity | |
| GO:0033984 | ISO | PLAZA Integrative Orthology | indole-3-glycerol-phosphate lyase activity | AT4G02610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G54640 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G02610 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G02610 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.5.3.5.1 | Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit alpha |