Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Ah.02g111410 Tryptophan synthase alpha chain (EC 4.2.1.20) (Indole synthase) (Indole-3-glycerol-phosphate lyase) (EC 4.1.2.8) AmaHy_arrow1_Scaffold_2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2240 LG-5 + View
Acer truncatum Atru.chr5.1557 chr5 - View
Actinidia chinensis Actinidia09095 Lachesis_group24 + View
Actinidia chinensis Actinidia19978 Lachesis_group19 + View
Arabidopsis lyrata AL6G50440 scaffold_6 - View
Avicennia marina MSTRG.12544 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy2G03505 CHR02 + View
Aquilegia oxysepala Aqoxy5G00369 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8QW0YW 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JTL6YC 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT4G02610 Aldolase-type TIM barrel family protein Aldolase-type TIM barrel family protein%3B CONTAINS InterPro DOMAIN/s: Tryptophan synthase%2C alpha chain%2C active site (InterPro:IPR018204)%2C Aldolase-type TIM barrel (InterPro:IPR013785)%2C Ribulose-phosphate binding barrel (InterPro:IPR011060)%2C Tryptophan synthase%2C alpha chain (InterPro:IPR002028)%3B BEST Arabidopsis thaliana protein match is: tryptophan synthase alpha chain (TAIR:AT3G54640.1)%3B Has 7706 Blast hits to 7706 proteins in 2293 species: Archae - 225%3B Bacteria - 4607%3B Metazoa - 6%3B Fungi - 175%3B Plants - 137%3B Viruses - 0%3B Other Eukaryotes - 2556 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0665G493 AmTr_v1.0_scaffold00002 + View
Beta vulgaris EL10Ac5g10468 K01695 - tryptophan synthase alpha chain (trpA) Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0019288 hypothetical protein CICLE_v10021275mg [Citrus clementina] Chr11 + View
Cannabis sativa CANSAT01G2906 NC_044373.1 + View
Corylus avellana Haze_24525 Similar to TRPA1: Tryptophan synthase alpha chain (Arabidopsis thaliana OX%3D3702) 8 - View
Citrus clementina Ciclev10021275m.g scaffold_3 + View
Ceratophyllum demersum CDE02G0658 1 - View
Ceratophyllum demersum CDE06G0167 4 + View
Ceratophyllum demersum CDE07G1756 5 - View
Carpinus fangiana Cfa002320 Cfa01 - View
Cardamine hirsuta CARHR250900 Tryptophan synthase alpha chain Chr8 + View
Carya illinoinensis CiPaw.03G256900 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA Chr03 - View
Citrullus lanatus ClCG07G000590 TRYPTOPHAN SYNTHASE ALPHA CHAIN family protein CG_Chr07 + View
Cucumis melo MELO3C014311.2 Tryptophan synthase, alpha chain chr05 + View
Chenopodium quinoa AUR62032264 TRPA1: Tryptophan synthase alpha chain C_Quinoa_Scaffold_1762 + View
Chenopodium quinoa AUR62011950 TRPA1: Tryptophan synthase alpha chain C_Quinoa_Scaffold_2008 + View
Capsella rubella Carub.0006s3453 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase scaffold_6 - View
Daucus carota DCAR_002689 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv34563 GWHABJS00000010 + View
Durio zibethinus Duzib138G1882 NW_019167893.1 - View
Erigeron canadensis ECA248G3719 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.D00368 scaffold_4 - View
Eutrema salsugineum Thhalv10028877m.g 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA scaffold_3 + View
Fragaria x ananassa FAN24G0926 K01695 - tryptophan synthase alpha chain (trpA) Fvb2-2 - View
Fragaria x ananassa FAN20G2222 K01695 - tryptophan synthase alpha chain (trpA) Fvb2-3 - View
Fragaria vesca FvH4_2g22570 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA Fvb2 + View
Gossypium hirsutum Gohir.A08G188200 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase A08 - View
Gossypium hirsutum Gohir.D08G206600 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase D08 - View
Glycine max Glyma.19G160800 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase Gm19 - View
Glycine max Glyma.03G158400 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase Gm03 - View
Gossypium raimondii Gorai.004G218800 Chr04 - View
Helianthus annuus HanXRQChr01g0006881 Probable tryptophan synthase alpha chain HanXRQChr01 + View
Lupinus albus Lalb_Chr01g0019901 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase Lalb_Chr01 + View
Lotus japonicus Lj1g0002030 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase chr1 + View
Lonicera japonica Lj2C1160T10 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_186800 Lsat_1_v8_lg_5 + View
Malus domestica MD10G1193300 tryptophan synthase alpha chain Chr10 + View
Malus domestica MD05G1206300 tryptophan synthase alpha chain Chr05 + View
Manihot esculenta Manes.01G202100 Chromosome01 + View
Manihot esculenta Manes.05G084000 Chromosome05 - View
Medicago truncatula Medtr7g096080 indole-3-glycerol phosphate lyase IGL1 chr7 - View
Nelumbo nucifera Nn1g02538 chr1 + View
Nelumbo nucifera Nn3g19497 chr3 - View
Olea europaea Oeu025787.1 chr16 - View
Oryza sativa ssp. japonica Os07g0182100 Similar to Tryptophan synthase alpha chain. chr07 - View
Oryza sativa ssp. japonica Os03g0797000 Similar to Indole synthase. chr03 - View
Prunus persica Prupe.8G232700 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA Pp08 + View
Pisum sativum Psat3g061160 Tryptophan synthase alpha chain chr3LG5 - View
Papaver somniferum PSO832G3199 NC_039367.1 + View
Papaver somniferum PSO210G5132 NC_039359.1 - View
Populus trichocarpa Potri.005G217700 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase Chr05 - View
Populus trichocarpa Potri.002G045700 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase Chr02 + View
Phaseolus vulgaris Phvul.001G156200 4.1.2.8 - Indole-3-glycerol-phosphate lyase / TSA Chr01 - View
Quercus lobata QL12p042634 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0289611 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0030700 chr13 - View
Salvia bowleyana SalBow4G1970 GWHASIU00000008 + View
Salix brachista Sabra05G0166900 GWHAAZH00000005 - View
Salix brachista Sabra02G0036600 GWHAAZH00000002 + View
Sechium edule Sed0007538 LG05 + View
Schrenkiella parvula Sp6g02520 4.1.2.8//4.2.1.20 - Indole-3-glycerol-phosphate lyase / TSA // Tryptophan synthase / Tryptophan synthetase ch6-1 + View
Selenicereus undatus Hund09565 Scaffold_10417 - View
Trochodendron aralioides TAR362G0898 group17 - View
Trochodendron aralioides TAR365G0658 group16 + View
Theobroma cacao Thecc.01G268100 Aldolase-type TIM barrel family protein Chromosome_1 + View
Trifolium pratense TPR.G19110 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI18G1059 NC_052241.1 - View
Tripterygium wilfordii TWI12G0422 NC_052243.1 - View
Vaccinium macrocarpon vmacro02625 Similar to TRPA1: Tryptophan synthase alpha chain (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2504 CM024070.1 - View
Vitis vinifera GSVIVG01000716001 chr7 - View
Zea mays Zm00001eb060830 Zm00001e005997 Tryptophan synthase alpha chain chloroplastic 1 - View
Zea mays Zm00001eb301540 Zm00001e032951 Indole-3-glycerol phosphate lyase tryptophan synthase alpha subunit1 7 + View