Gene: Ah.11g044150

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.11g044150
  • Transcript Identifier Ah.11g044150-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_11 : 12489898-12497477 : positive

Gene Family Information

  • ID HOM05D005089
  • #Genes/#Species 147/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.11g044150-v1.1.a1

Descriptions

  • Description Sm-like protein LSM8 (AtLSM8) (U6 snRNA-associated Sm-like protein LSM8)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process AT1G65700

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65700

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005688
IEA
InterProU6 snRNP
GO:0046540
IEA
InterProU4/U6 x U5 tri-snRNP complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G65700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044642 U6 snRNA-associated Sm-like protein Lsm1/8
IPR034103 Sm-like protein Lsm8
IPR010920 LSM domain superfamily
IPR001163 LSM domain, eukaryotic/archaea-type
Mapman id Description
16.2.3.8 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm8