Gene: Ah.10g037400
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.10g037400
- Transcript Identifier Ah.10g037400-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_10 : 21588226-21597946 : negative
Gene Family Information
- ID HOM05D002267
- #Genes/#Species 297/99
- Phylogenetic origin
- ID ORTHO05D005902
- #Genes/#Species 150/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.10g037400-v1.1.a1
Descriptions
- Description Tryptophan synthase beta chain 2 (EC 4.2.1.20)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000162 | IEA | InterPro | tryptophan biosynthetic process | |
| GO:0006568 | IEA | InterPro | tryptophan metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0046537 | IEA | InterPro | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | |
| GO:0004834 | IEA | InterPro | tryptophan synthase activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G38530 |
| GO:0052684 | ISO | PLAZA Integrative Orthology | L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | AT5G38530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G09520 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004456 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
| IPR006316 | Tryptophan synthase, beta chain-like |
| IPR001926 | Pyridoxal-phosphate dependent enzyme |
| IPR042253 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase superfamily |
| IPR023026 | Tryptophan synthase beta chain/beta chain-like |
| IPR017850 | Alkaline-phosphatase-like, core domain superfamily |
| IPR006124 | Metalloenzyme |
| IPR036052 | Tryptophan synthase beta subunit-like PLP-dependent enzyme |
| IPR006654 | Tryptophan synthase, beta chain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |