Gene: Ah.04g165840

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.04g165840
  • Transcript Identifier Ah.04g165840-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_4 : 28056836-28061993 : positive

Gene Family Information

  • ID HOM05D000561
  • #Genes/#Species 984/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.04g165840-v1.1.a1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034063
ISO
PLAZA Integrative Orthologystress granule assembly AT3G19130
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT1G11650
GO:0051028
ISO
PLAZA Integrative OrthologymRNA transport Os04g0625800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G19130
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G11650
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G19130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os04g0625800
GO:0010494
ISO
PLAZA Integrative Orthologycytoplasmic stress granule AT3G19130
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm Os04g0625800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G19130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.8.4 RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)