Gene: Ah.01g023110

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.01g023110
  • Transcript Identifier Ah.01g023110-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_1 : 36511668-36529586 : negative

Gene Family Information

  • ID HOM05D001563
  • #Genes/#Species 409/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.01g023110-v1.1.a1

Descriptions

  • Description Probable ubiquitin-conjugating enzyme E2 23 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 23) (Ubiquitin carrier protein 23)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044257
ISO
PLAZA Integrative Orthologycellular protein catabolic process AT2G33770
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT2G33770
GO:0006817
ISO
PLAZA Integrative Orthologyphosphate ion transport AT2G33770
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G60900
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT1G60900
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G36690
GO:2000185
ISO
PLAZA Integrative Orthologyregulation of phosphate transmembrane transport AT2G33770
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT2G33770
GO:0055062
ISO
PLAZA Integrative Orthologyphosphate ion homeostasis AT2G33770
GO:0006397
IEA
InterPromRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G36690
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G60900
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G16920
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT4G36690
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G36690
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G33770
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G33770
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G60900
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000608 Ubiquitin-conjugating enzyme E2
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR006529 U2 snRNP auxilliary factor, large subunit, splicing factor
Mapman id Description
16.2.1.2.11.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor heterodimer.large subunit U2AF2/U2AF65
25.3.3.1 Nutrient uptake.phosphorus assimilation.phosphate homeostasis.E2 ubiquitin-conjugating protein (PHO2)