Gene: Ah.01g006740

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.01g006740
  • Transcript Identifier Ah.01g006740-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_1 : 7111611-7116295 : negative

Gene Family Information

  • ID HOM05D000144
  • #Genes/#Species 2569/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.01g006740-v1.1.a1

Descriptions

  • Description Peptidyl-prolyl cis-trans isomerase CYP40 (PPIase CYP40) (EC 5.2.1.8) (Cyclophilin of 40 kDa) (Cyclophilin-40) (Protein SQUINT) (Rotamase CYP40)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0010582
ISO
PLAZA Integrative Orthologyfloral meristem determinacy AT2G15790
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT2G15790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G15790
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G15790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR019734 Tetratricopeptide repeat
IPR013105 Tetratricopeptide repeat 2
IPR029000 Cyclophilin-like domain superfamily
Mapman id Description
16.9.2.8 RNA processing.mRNA silencing.miRNA pathway.AGO1-regulatory protein (SQN)
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)