Gene: Actinidia00541
General Information
Structural Information
- Species Actinidia chinensis
- Gene Identifier Actinidia00541
- Transcript Identifier Actinidia00541.t1
- Gene Type Coding gene
- Location Lachesis_group12 : 1604130-1620012 : positive
Gene Family Information
- ID HOM05D003708
- #Genes/#Species 185/97
- Phylogenetic origin
- ID ORTHO05D004452
- #Genes/#Species 180/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Actinidia00541.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006231 | IEA | InterPro | dTMP biosynthetic process | |
| GO:0046654 | IEA | InterPro | tetrahydrofolate biosynthetic process | |
| GO:0009089 | IEA | InterPro | lysine biosynthetic process via diaminopimelate |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004799 | IEA | InterPro | thymidylate synthase activity | |
| GO:0004146 | IEA | InterPro | dihydrofolate reductase activity | |
| GO:0016741 | IEA | InterPro | transferase activity, transferring one-carbon groups | |
| GO:0008836 | IEA | InterPro | diaminopimelate decarboxylase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G14390 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G11880 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G11880 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023451 | Thymidylate synthase/dCMP hydroxymethylase domain |
| IPR009006 | Alanine racemase/group IV decarboxylase, C-terminal |
| IPR000398 | Thymidylate synthase |
| IPR036926 | Thymidylate synthase/dCMP hydroxymethylase superfamily |
| IPR029066 | PLP-binding barrel |
| IPR022643 | Orn/DAP/Arg decarboxylase 2, C-terminal |
| IPR001796 | Dihydrofolate reductase domain |
| IPR024072 | Dihydrofolate reductase-like domain superfamily |
| IPR045097 | Thymidylate synthase/dCMP hydroxymethylase |
| IPR022644 | Orn/DAP/Arg decarboxylase 2, N-terminal |
| IPR002986 | Diaminopimelate decarboxylase, LysA |
| Mapman id | Description |
|---|---|
| 4.1.2.2.3.5 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase |
| 6.3.1.2 | Nucleotide metabolism.deoxynucleotides.biosynthesis.thymidylate synthase |
| 7.5.5 | Coenzyme metabolism.tetrahydrofolate metabolism.dihydrofolate reductase |