Gene: AT3G15590

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G15590
  • Transcript Identifier AT3G15590.1
  • Gene Type Coding gene
  • Location Chr3 : 5275568-5277658 : negative

Gene Family Information

  • ID HOM05D002649
  • #Genes/#Species 259/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G15590.1
  • uniprot Q9LRP6

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: DNA binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: PENTATRICOPEPTIDE REPEAT 596 (TAIR:AT1G80270.3); Has 8565 Blast hits to 4880 proteins in 211 species: Archae - 0; Bacteria - 30; Metazoa - 169; Fungi - 54; Plants - 8144; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IDA
IEA
GOA Databasemitochondrion
GO:0005739
HDA
ISM, IBA
Gene Ontologymitochondrion2 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.20 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (POCO)