Gene: Aa31LG4G15510
General Information
Structural Information
- Species Aethionema arabicum
- Gene Identifier Aa31LG4G15510
- Transcript Identifier Aa31LG4G15510.mRNA1
- Gene Type Coding gene
- Location LG-4 : 9708703-9714086 : negative
Gene Family Information
- ID HOM05D000215
- #Genes/#Species 1875/100
- Phylogenetic origin
- ID ORTHO05D001676
- #Genes/#Species 371/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Aa31LG4G15510.mRNA1
- Alias Aa31LG4G15510
- Alias Aa31LG4G15510-mRNA-1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | InterPro | protein ubiquitination | |
| GO:0007166 | IEA | InterPro | cell surface receptor signaling pathway | |
| GO:0043066 | ISO | PLAZA Integrative Orthology | negative regulation of apoptotic process | AT3G46510 |
| GO:0048586 | ISO | PLAZA Integrative Orthology | regulation of long-day photoperiodism, flowering | Os12g0570000 |
| GO:0043069 | ISO | PLAZA Integrative Orthology | negative regulation of programmed cell death | Os12g0570000 |
| GO:0050777 | ISO | PLAZA Integrative Orthology | negative regulation of immune response | AT3G46510 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G46510 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT3G46510 |
| GO:0031348 | ISO | PLAZA Integrative Orthology | negative regulation of defense response | Os12g0570000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0070696 | ISO | PLAZA Integrative Orthology | transmembrane receptor protein serine/threonine kinase binding | AT3G46510 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G46510 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G46510 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G46510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000225 | Armadillo |
| IPR003613 | U box domain |
| IPR011989 | Armadillo-like helical |
| IPR036537 | Adaptor protein Cbl, N-terminal domain superfamily |
| IPR000608 | Ubiquitin-conjugating enzyme E2 |
| IPR016135 | Ubiquitin-conjugating enzyme/RWD-like |
| IPR016024 | Armadillo-type fold |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase |
| 19.2.2.1.5.1.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Ubc13 |
| 19.2.4.2.1.2 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E2 ubiquitin-conjugating component Ubc7/13/14 |