Gene: ATR1096G060

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR1096G060
  • Transcript Identifier ATR1096G060.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00095 : 2138994-2139464 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00095.113.v1.0
  • pacid 31558980

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G03240
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G20620
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT4G05320
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT4G05320
GO:0006464
ISO
PLAZA Integrative Orthologycellular protein modification process AT4G05320
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G20620
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G37640
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G09790
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G23410
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G23410
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G09790
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G09790
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G37640
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G47110
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT2G47110
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019956 Ubiquitin domain
IPR002906 Ribosomal protein S27a
IPR029071 Ubiquitin-like domain superfamily
IPR000626 Ubiquitin-like domain
IPR011332 Zinc-binding ribosomal protein
IPR038582 S27a-like superfamily
Mapman id Description
17.1.3.1.29 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS27a