Gene: ATR0810G096
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0810G096
- Transcript Identifier ATR0810G096.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00041 : 111783-112694 : positive
Gene Family Information
- ID HOM05D000244
- #Genes/#Species 1727/95
- Phylogenetic origin
- ID ORTHO05D000179
- #Genes/#Species 1482/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00041.9.v1.0
- pacid 31559731
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT3G60870 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT2G45430 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT3G60870 |
| GO:0009647 | ISO | PLAZA Integrative Orthology | skotomorphogenesis | AT2G45430 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G45430 |
| GO:0042826 | ISO | PLAZA Integrative Orthology | histone deacetylase binding | AT2G45430 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT2G45430 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G60870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.8.1 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL) |