Gene: ATR0626G080

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0626G080
  • Transcript Identifier ATR0626G080.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00025 : 5072099-5079191 : negative

Gene Family Information

  • ID HOM05D000912
  • #Genes/#Species 657/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00025.342.v1.0
  • pacid 31566361

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Homology (enrichment)regulation of transcription, DNA-templated HOM05D000912
GO:0006413
ISO
PLAZA Integrative Orthologytranslational initiation AT1G16720
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT1G16720
GO:0016573
ISO
PLAZA Homology (enrichment)histone acetylation HOM05D000912

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004402
ISO
PLAZA Homology (enrichment)histone acetyltransferase activity HOM05D000912
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16720
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G16720
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G16720

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G16720
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G16720
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT1G16720
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G16720
GO:0031969
ISO
PLAZA Integrative Orthologychloroplast membrane AT1G16720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30
IPR036291 NAD(P)-binding domain superfamily
IPR008979 Galactose-binding-like domain superfamily
IPR016040 NAD(P)-binding domain
Mapman id Description
1.1.1.3.19 Photosynthesis.photophosphorylation.photosystem II.assembly.psbA-translation activator (HCF173)