Gene: AT5G67530

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G67530
  • Transcript Identifier AT5G67530.1
  • Gene Type Coding gene
  • Location Chr5 : 26941260-26943878 : positive

Gene Family Information

  • ID HOM05D000144
  • #Genes/#Species 2569/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G67530.1
  • symbol PUB49
  • Alias ATPUB49,PLANT U-BOX 49
  • uniprot Q9FJX0

Descriptions

  • Description plant U-box 49
  • Computational description plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000413
IEA
GOA Databaseprotein peptidyl-prolyl isomerization
GO:0000413
IBA
Gene Ontologyprotein peptidyl-prolyl isomerization1
GO:0000413
IEA
InterProprotein peptidyl-prolyl isomerization
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0006457
IEA
Gene Ontologyprotein folding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0003755
IEA
GOA Databasepeptidyl-prolyl cis-trans isomerase activity
GO:0003755
IBA
Gene Ontologypeptidyl-prolyl cis-trans isomerase activity1
GO:0003755
IEA
InterPropeptidyl-prolyl cis-trans isomerase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0034450
IBA
Gene Ontologyubiquitin-ubiquitin ligase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR044666 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like
IPR026951 Peptidyl-prolyl cis-trans isomerase like 2, U-box domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR029000 Cyclophilin-like domain superfamily
IPR003613 U box domain
Mapman id Description
18.13.1 Protein modification.protein folding.protein folding catalyst (Cyclophilin)