Gene: AT5G65740

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65740
  • Transcript Identifier AT5G65740.8
  • Gene Type Coding gene
  • Location Chr5 : 26301702-26302892 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65740.8
  • uniprot Q1ECQ9

Descriptions

  • Description zinc ion binding protein
  • Computational description zinc ion binding; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Fanconi anemia complex, subunit FancL, WD-repeat region (InterPro:IPR019162); Has 162 Blast hits to 162 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0036297
IEA
Gene Ontologyinterstrand cross-link repair
GO:0036297
IEA
InterProinterstrand cross-link repair
GO:0006513
IBA
Gene Ontologyprotein monoubiquitination1
GO:0006281
IBA
Gene OntologyDNA repair1
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0043240
IEA
Gene OntologyFanconi anaemia nuclear complex
GO:0043240
IEA
InterProFanconi anaemia nuclear complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR026848 E3 ubiquitin-protein ligase FANCL
IPR026850 FANCL C-terminal domain
IPR043003 FANCL, UBC-like domain 3 superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044037 FANCL, UBC-like domain 3
Mapman id Description
35.1 not assigned.annotated