Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 3.3e-129 464.9 217 100.0
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 3.8e-117 424.9 215 90.2
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 8.8e-114 413.7 215 88.4
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 2.4e-111 405.6 217 86.2
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 8.5e-109 397.1 215 85.6
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 5.5e-108 394.4 215 85.6
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 4.7e-107 391.3 215 85.1
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 4.7e-107 391.3 215 85.1
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.7e-96 355.1 213 77.0
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.9e-94 347.8 193 84.5
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.9e-88 328.9 215 75.3
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.4e-79 298.1 215 62.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.0e-78 294.7 215 62.3
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.1e-76 290.4 216 62.5
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 4.3e-76 288.5 216 60.2
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 7.3e-76 287.7 219 60.7
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 9.5e-76 287.3 216 62.0
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.1e-75 286.2 215 60.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.6e-75 285.4 214 60.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.1e-74 283.9 212 59.9
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 1.1e-74 283.9 215 58.6
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.1e-74 283.9 215 62.3
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.4e-74 283.5 216 59.7
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 5.2e-74 281.6 214 59.8
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 6.8e-74 281.2 215 60.0
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 3.4e-73 278.9 213 58.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 4.4e-73 278.5 216 58.8
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 7.5e-73 277.7 213 60.6
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.3e-72 276.9 212 59.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 2.9e-72 275.8 212 58.5
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 8.3e-72 274.2 216 60.6
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 1.1e-71 273.9 215 59.1
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 1.9e-71 273.1 212 59.4
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 2.4e-71 272.7 212 61.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 7.1e-71 271.2 216 57.9
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 7.1e-71 271.2 216 58.3
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.2e-70 270.4 221 56.6
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 1.6e-70 270.0 212 58.0
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.5e-70 268.9 212 57.5
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 4.6e-70 268.5 216 56.5
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.8e-70 267.7 215 58.1
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 7.8e-70 267.7 214 56.5
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.0e-69 267.3 215 58.1
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.7e-69 266.5 212 58.0
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.3e-69 266.2 216 56.5
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-68 263.8 223 56.5
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 9.5e-68 260.8 211 55.5
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.8e-67 259.2 212 56.1
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 3.6e-67 258.8 219 56.6
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 5.2e-66 255.0 211 56.4
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.0e-65 253.1 226 54.4
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 1.4e-63 246.9 213 52.1
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.4e-63 245.0 220 55.5
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 1.6e-62 243.4 212 53.8
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 3.9e-61 238.8 212 53.3
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 3.9e-61 238.8 212 56.1
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 1.1e-60 237.3 211 51.2
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.9e-60 236.5 216 52.3
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.3e-60 235.7 212 53.3
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 3.3e-60 235.7 192 54.2
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 4.7e-59 231.9 216 51.9
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.3e-56 223.8 216 51.9
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 3.4e-49 199.1 214 44.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.6e-46 188.7 246 41.5
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.0e-45 187.6 196 47.4
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 2.4e-42 176.4 227 42.7
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.2e-41 174.1 211 39.8
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.7e-40 170.2 207 38.6
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 3.8e-40 169.1 236 40.3
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.6e-38 163.7 218 39.9
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 6.0e-38 161.8 149 53.0
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 3.4e-33 146.0 153 47.1
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.7e-32 143.7 110 60.0
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 4.9e-32 142.1 127 51.2
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.4e-31 140.6 107 62.6
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 4.6e-30 135.6 150 48.0
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 3.3e-28 129.4 64 89.1
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 1.6e-22 110.5 263 29.3
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 7.9e-14 81.6 58 62.1
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.0e-13 81.3 169 34.9
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 3.1e-10 69.7 47 66.0


User provided reference genes

Program Settings