Gene: AT5G61770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G61770
  • Transcript Identifier AT5G61770.2
  • Gene Type Coding gene
  • Location Chr5 : 24815888-24817495 : positive

Gene Family Information

  • ID HOM05D004753
  • #Genes/#Species 155/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G61770.2
  • symbol PPAN
  • uniprot Q9ASU7

Descriptions

  • Description PETER PAN-like protein
  • Computational description PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 946 Blast hits to 859 proteins in 217 species: Archae - 0; Bacteria - 10; Metazoa - 449; Fungi - 173; Plants - 58; Viruses - 18; Other Eukaryotes - 238 (source: NCBI BLink).
  • Computational description PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 1471 Blast hits to 1151 proteins in 223 species: Archae - 0; Bacteria - 34; Metazoa - 730; Fungi - 196; Plants - 73; Viruses - 37; Other Eukaryotes - 401 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
Gene OntologyrRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0006412
IMP
Gene Ontologytranslation1
GO:0000027
IBA
Gene Ontologyribosomal large subunit assembly2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IBA
IEA
Gene OntologyrRNA binding2
GO:0019843
IEA
InterProrRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005730
IDA
Gene Ontologynucleolus1
GO:0030687
IBA
Gene Ontologypreribosome, large subunit precursor2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007109 Brix domain
IPR045112 Protein Peter Pan-like
Mapman id Description
17.1.2.2.1.1 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (SSF1)