Gene: AT5G57970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G57970
  • Transcript Identifier AT5G57970.1
  • Gene Type Coding gene
  • Location Chr5 : 23467316-23468910 : positive

Gene Family Information

  • ID HOM05D000853
  • #Genes/#Species 700/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G57970.1
  • uniprot Q9FJL9

Descriptions

  • Description DNA glycosylase superfamily protein
  • Computational description DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT1G80850.1); Has 3809 Blast hits to 3727 proteins in 1589 species: Archae - 10; Bacteria - 3189; Metazoa - 57; Fungi - 9; Plants - 164; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
Gene Ontologybase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008725
IEA
Gene OntologyDNA-3-methyladenine glycosylase activity
GO:0008725
IEA
InterProDNA-3-methyladenine glycosylase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR005019 Methyladenine glycosylase
Mapman id Description
35.1 not assigned.annotated