Gene: AT5G56290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G56290
  • Transcript Identifier AT5G56290.1
  • Gene Type Coding gene
  • Location Chr5 : 22786655-22791972 : positive

Gene Family Information

  • ID HOM05D004098
  • #Genes/#Species 172/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G56290.1
  • symbol PEX5
  • Alias ATPEX5,ARABIDOPSIS PEROXIN 5,EMB2790,EMBRYO DEFECTIVE 2790
  • uniprot Q9FMA3

Descriptions

  • Description peroxin 5
  • Computational description peroxin 5 (PEX5); CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G11540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
IMP
Gene Ontologyresponse to auxin1
GO:0006625
IGI
Gene Ontologyprotein targeting to peroxisome2
GO:0016560
IBA
Gene Ontologyprotein import into peroxisome matrix, docking3
GO:0007031
IEA
GOA Databaseperoxisome organization
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0005515
IEA
InterProprotein binding
GO:0005052
IBA
Gene Ontologyperoxisome matrix targeting signal-1 binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009536
HDA
Gene Ontologyplastid5
GO:0005829
IBA
Gene Ontologycytosol3
GO:0005778
IEA
GOA Databaseperoxisomal membrane
GO:0005778
IBA
Gene Ontologyperoxisomal membrane3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005777
IEA
GOA Databaseperoxisome
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019734 Tetratricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR024111 PEX5/PEX5L
IPR001440 Tetratricopeptide repeat 1
Mapman id Description
23.4.1.1.1 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.component Pex5