Gene: AT5G45260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45260
  • Transcript Identifier AT5G45260.1
  • Gene Type Coding gene
  • Location Chr5 : 18326277-18332229 : positive

Gene Family Information

  • ID HOM05D000005
  • #Genes/#Species 11550/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45260.1
  • symbol RRS1
  • Alias ATWRKY52,ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52,SLH1,SENSITIVE TO LOW HUMIDITY 1
  • full_name RESISTANT TO RALSTONIA SOLANACEARUM 1
  • uniprot P0DKH5

Descriptions

  • Description Disease resistance protein (TIR-NBS-LRR class)
  • Computational description RESISTANT TO RALSTONIA SOLANACEARUM 1 (RRS1); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G45050.1); Has 19764 Blast hits to 15744 proteins in 620 species: Archae - 2; Bacteria - 1944; Metazoa - 284; Fungi - 50; Plants - 17133; Viruses - 4; Other Eukaryotes - 347 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IEA
InterProdefense response
GO:0042742
IMP
TAS
Gene Ontologydefense response to bacterium1 2
GO:0008219
IMP
Gene Ontologycell death2
GO:0007165
IEA
Gene Ontologysignal transduction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0043565
IEA
Gene Ontologysequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043531
IEA
Gene OntologyADP binding
GO:0043531
IEA
InterProADP binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding2
GO:0042802
IPI
Gene Ontologyidentical protein binding3
GO:0003953
IEA
Gene OntologyNAD+ nucleosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
TAS
Gene Ontologynucleus1
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032675 Leucine-rich repeat domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR044974 Disease resistance protein, plants
IPR002182 NB-ARC
IPR003657 WRKY domain
IPR011713 Leucine-rich repeat 3
IPR036576 WRKY domain superfamily
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily
IPR042197 Apoptotic protease-activating factors, helical domain
Mapman id Description
15.5.22.1 RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY)