Gene: AT5G45250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45250
  • Transcript Identifier AT5G45250.1
  • Gene Type Coding gene
  • Location Chr5 : 18321914-18326022 : negative

Gene Family Information

  • ID HOM05D000005
  • #Genes/#Species 11550/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45250.1
  • symbol RPS4
  • full_name RESISTANT TO P. SYRINGAE 4
  • uniprot Q9XGM3

Descriptions

  • Description Disease resistance protein (TIR-NBS-LRR class) family
  • Computational description RESISTANT TO P. SYRINGAE 4 (RPS4); CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G45060.1); Has 21522 Blast hits to 16345 proteins in 586 species: Archae - 12; Bacteria - 1045; Metazoa - 1640; Fungi - 92; Plants - 18158; Viruses - 0; Other Eukaryotes - 575 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045903
IBA
Gene Ontologypositive regulation of translational fidelity1
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
TAS
Gene Ontologydefense response2
GO:0006952
IEA
InterProdefense response
GO:0007165
IEA
GOA Databasesignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0009626
IMP
Gene Ontologyplant-type hypersensitive response3
GO:0002758
IDA
Gene Ontologyinnate immune response-activating signal transduction4
GO:0042742
IDA
Gene Ontologydefense response to bacterium5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003735
IBA
Gene Ontologystructural constituent of ribosome1
GO:0003953
IEA
GOA DatabaseNAD+ nucleosidase activity
GO:0003953
IEA
InterProNAD+ nucleosidase activity
GO:0019843
IBA
Gene OntologyrRNA binding1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0043531
IEA
Gene OntologyADP binding
GO:0043531
IEA
InterProADP binding
GO:0050135
IEA
Gene OntologyNAD(P)+ nucleosidase activity
GO:0061809
IEA
Gene OntologyNAD+ nucleotidase, cyclic ADP-ribose generating
GO:0005515
IPI
Gene Ontologyprotein binding6
GO:0042802
IPI
Gene Ontologyidentical protein binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015935
IBA
Gene Ontologysmall ribosomal subunit1
GO:0012505
IEA
GOA Databaseendomembrane system
GO:0012505
IDA
Gene Ontologyendomembrane system3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
Gene Ontologynucleus3
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
ISS
Gene Ontologymembrane2
GO:0009570
HDA
Gene Ontologychloroplast stroma8
GO:0005739
HDA
ISM
Gene Ontologymitochondrion9
GO:0009507
HDA
ISM
Gene Ontologychloroplast10

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011713 Leucine-rich repeat 3
IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
IPR042197 Apoptotic protease-activating factors, helical domain
IPR044974 Disease resistance protein, plants
IPR032675 Leucine-rich repeat domain superfamily
IPR002182 NB-ARC
Mapman id Description
35.1 not assigned.annotated