Gene: AT5G27270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G27270
  • Transcript Identifier AT5G27270.2
  • Gene Type Coding gene
  • Location Chr5 : 9606350-9609625 : positive

Gene Family Information

  • ID HOM05D006877
  • #Genes/#Species 117/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G27270.2
  • symbol EMB976
  • full_name EMBRYO DEFECTIVE 976
  • uniprot O04647

Descriptions

  • Description Tetratricopeptide repeat (TPR)-like superfamily protein
  • Computational description EMBRYO DEFECTIVE 976 (EMB976); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IMP
Gene OntologyGroup II intron splicing1
GO:0010239
IMP
Gene Ontologychloroplast mRNA processing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding2
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009570
IDA
Gene Ontologychloroplast stroma1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR033443 Pentacotripeptide-repeat region of PRORP
Mapman id Description
35.1 not assigned.annotated