Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G27270 Arabidopsis thaliana HOM05D006877 ORTHO05D008735 3.2e-204 716.1 532 100.0
CARHR185880 Cardamine hirsuta HOM05D006877 ORTHO05D008735 2.2e-144 517.3 533 81.8
Carub.0006s2526 Capsella rubella HOM05D006877 ORTHO05D008735 1.2e-142 511.5 533 82.2
A06p37650 Brassica napus HOM05D006877 ORTHO05D008735 8.0e-139 498.8 533 81.1
C07p40570 Brassica napus HOM05D006877 ORTHO05D008735 3.0e-138 496.9 533 80.7
BolC7t44594H Brassica oleracea HOM05D006877 ORTHO05D008735 1.5e-137 494.6 533 79.9
Sp2g20510 Schrenkiella parvula HOM05D006877 ORTHO05D008735 2.6e-137 493.8 533 80.5
BraA06t26685Z Brassica rapa HOM05D006877 ORTHO05D008735 3.4e-137 493.4 533 80.7
Aa31LG11G9010 Aethionema arabicum HOM05D006877 ORTHO05D008735 1.0e-130 471.9 532 78.0
AL6G39840 Arabidopsis lyrata HOM05D006877 ORTHO05D008735 8.9e-130 468.8 533 73.7
Thhalv10003569m.g Eutrema salsugineum HOM05D006877 ORTHO05D008735 3.5e-126 456.8 533 76.9
Prupe.2G325900 Prunus persica HOM05D006877 ORTHO05D008735 1.5e-97 361.7 532 66.0
THA.LOC104821701 Tarenaya hassleriana HOM05D006877 ORTHO05D008735 8.4e-96 355.9 531 68.5
TWI39G0452 Tripterygium wilfordii HOM05D006877 ORTHO05D008735 9.6e-92 342.4 533 64.7
Atru.chr12.1962 Acer truncatum HOM05D006877 ORTHO05D008735 4.9e-88 330.1 533 63.4
Lalb_Chr13g0294611 Lupinus albus HOM05D006877 ORTHO05D008735 6.4e-88 329.7 533 63.6
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 4.2e-87 327.0 539 62.7
RcHm_v2.0_Chr1g0384191 Rosa chinensis HOM05D006877 ORTHO05D008735 2.7e-86 324.3 533 63.6
Ciclev10018634m.g Citrus clementina HOM05D006877 ORTHO05D008735 2.5e-84 317.8 532 63.0
FvH4_7g33960 Fragaria vesca HOM05D006877 ORTHO05D008735 6.2e-83 313.2 526 63.7
VMungo0251G1190 Vigna mungo HOM05D006877 ORTHO05D008735 1.3e-77 295.4 536 57.8
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 3.9e-77 293.9 529 61.1
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 3.7e-75 287.3 532 61.7
FAN03G2267 Fragaria x ananassa HOM05D006877 ORTHO05D008735 4.8e-75 287.0 539 61.2
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 4.8e-75 287.0 529 60.7
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.4e-74 285.4 543 61.3
Thecc.05G213300 Theobroma cacao HOM05D006877 ORTHO05D008735 1.5e-73 282.0 526 61.0
Lj4g0001495 Lotus japonicus HOM05D006877 ORTHO05D008735 3.4e-73 280.8 535 60.7
GSVIVG01024409001 Vitis vinifera HOM05D006877 ORTHO05D008735 3.4e-73 280.8 531 55.6
Phvul.003G065400 Phaseolus vulgaris HOM05D006877 ORTHO05D008735 1.0e-72 279.3 528 57.0
Gohir.A08G221900 Gossypium hirsutum HOM05D006877 ORTHO05D008735 3.2e-71 274.2 297 48.1
Gorai.004G258300 Gossypium raimondii HOM05D006877 ORTHO05D008735 1.6e-70 271.9 295 47.5
Gohir.D08G242601 Gossypium hirsutum HOM05D006877 ORTHO05D008735 4.6e-70 270.4 297 47.1
Duzib106G0107 Durio zibethinus HOM05D006877 ORTHO05D008735 4.8e-67 260.4 295 46.1
Aqoxy3G02132 Aquilegia oxysepala HOM05D006877 ORTHO05D008735 1.8e-66 258.5 548 56.9
CANSAT21G1458 Cannabis sativa HOM05D006877 ORTHO05D008735 2.4e-66 258.1 293 45.1
PSO063G6761 Papaver somniferum HOM05D006877 ORTHO05D008735 2.0e-65 255.0 531 58.2
QL09p024038 Quercus lobata HOM05D006877 ORTHO05D008735 2.6e-65 254.6 532 58.1
Lj1A1033T71 Lonicera japonica HOM05D006877 ORTHO05D008735 2.1e-62 245.0 311 42.4
Manes.09G127200 Manihot esculenta HOM05D006877 ORTHO05D008735 3.0e-61 241.1 529 58.0
Nn1g01910 Nelumbo nucifera HOM05D006877 ORTHO05D008735 3.0e-61 241.1 281 45.9
FAN01G1958 Fragaria x ananassa HOM05D006877 ORTHO05D008735 1.5e-60 238.8 342 40.1
Actinidia18704 Actinidia chinensis HOM05D006877 ORTHO05D008735 1.3e-59 235.7 533 56.5
Cpa.g.sc39.73 Carica papaya HOM05D006877 ORTHO05D008735 1.6e-59 235.3 260 50.0
FAN10G2126 Fragaria x ananassa HOM05D006877 ORTHO05D008735 4.8e-59 233.8 345 40.0
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 6.3e-59 233.4 298 45.0
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 8.2e-59 233.0 281 47.3
Dinv17258 Davidia involucrata HOM05D006877 ORTHO05D008735 5.3e-58 230.3 532 53.2
DCAR_020407 Daucus carota HOM05D006877 ORTHO05D008735 6.9e-58 229.9 311 40.2
Medtr8g080940 Medicago truncatula HOM05D006877 ORTHO05D008735 2.0e-57 228.4 535 57.0
Ca_18009_v3 Cicer arietinum L. HOM05D006877 ORTHO05D008735 4.5e-57 227.3 535 56.6
arahy.Tifrunner.gnm1.ann1.VTBJ7F Arachis hypogaea HOM05D006877 ORTHO05D008735 7.7e-57 226.5 535 56.8
Hma1.2p1_0758F.1_g213710 Hydrangea macrophylla HOM05D006877 ORTHO05D008735 1.0e-56 226.1 535 56.8
arahy.Tifrunner.gnm1.ann1.G9QUK2 Arachis hypogaea HOM05D006877 ORTHO05D008735 1.3e-56 225.7 535 56.8
Glyma.08G106500 Glycine max HOM05D006877 ORTHO05D008735 2.9e-56 224.6 536 56.3
SGA_v2.0_scaffold18G08509 Striga asiatica HOM05D006877 ORTHO05D008735 5.0e-56 223.8 531 56.7
BcaNung02478 Brassica carinata HOM05D000721 ORTHO05D001990 1.1e-55 222.6 131 85.5
PGR042G1249 Punica granatum HOM05D006877 ORTHO05D008735 1.1e-55 222.6 300 40.7
Psat7g076160 Pisum sativum HOM05D006877 ORTHO05D008735 1.2e-54 219.2 535 57.2
TPR.G11966 Trifolium pratense HOM05D006877 ORTHO05D008735 4.6e-54 217.2 535 55.5
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 1.8e-53 215.3 530 55.3
COL.COLO4_11806 Corchorus olitorius HOM05D006877 ORTHO05D008735 5.7e-52 210.3 268 42.5
EL10Ac3g05079 Beta vulgaris HOM05D006877 ORTHO05D008735 7.4e-52 209.9 531 55.6
Ah.04g156540 Amaranthus hybridus HOM05D006877 ORTHO05D008735 3.7e-51 207.6 533 55.3
Sc25g0001210 Simmondsia chinensis HOM05D006877 ORTHO05D008735 1.4e-50 205.7 530 51.5
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 6.9e-50 203.4 284 41.5
CSS0011113 Camellia sinensis var. sinensis HOM05D006877 ORTHO05D008735 1.2e-49 202.6 533 54.2
Rhsim09G0212700 Rhododendron simsii HOM05D006877 ORTHO05D008735 2.2e-48 198.4 534 55.2
Migut.F00097 Erythranthe guttata HOM05D006877 ORTHO05D008735 2.9e-48 198.0 291 39.9
ECA246G2862 Erigeron canadensis HOM05D006877 ORTHO05D008735 1.9e-47 195.3 531 53.1
SalBow4G0068 Salvia bowleyana HOM05D006877 ORTHO05D008735 9.4e-47 193.0 279 39.4
Eucgr.A02969 Eucalyptus grandis HOM05D006877 ORTHO05D008735 1.6e-46 192.2 257 45.1
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 5.7e-44 183.7 263 39.5
ClCG02G007690 Citrullus lanatus HOM05D006877 ORTHO05D008735 6.3e-43 180.3 272 37.9
CsaV3_6G010140 Cucumis sativus L. HOM05D006877 ORTHO05D008735 3.1e-42 177.9 262 38.2
Sed0012706 Sechium edule HOM05D006877 ORTHO05D008735 3.1e-42 177.9 260 36.9
SalBow4G3121 Salvia bowleyana HOM05D006877 ORTHO05D008735 2.6e-41 174.9 264 37.9
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 2.6e-41 174.9 257 38.9
MELO3C024733.2 Cucumis melo HOM05D006877 ORTHO05D008735 3.5e-41 174.5 274 38.7
HanXRQChr01g0027911 Helianthus annuus HOM05D006877 ORTHO05D008735 3.5e-41 174.5 271 36.5
Lsat_1_v5_gn_3_600 Lactuca sativa HOM05D006877 ORTHO05D008735 4.5e-41 174.1 280 37.1
CDE03G0296 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 7.7e-41 173.3 532 52.3
Peaxi162Scf00745g00840 Petunia axillaris HOM05D006877 ORTHO05D008735 1.0e-40 172.9 264 39.0
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 5.0e-40 170.6 254 40.2
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 2.5e-39 168.3 249 39.4
HPP92_012823 Vanilla planifolia HOM05D006877 ORTHO05D008735 3.2e-39 167.9 530 49.4
Solyc03g097000.3 Solanum lycopersicum HOM05D006877 ORTHO05D008735 7.2e-39 166.8 264 37.9
ATR0829G170 Amborella trichopoda HOM05D006877 ORTHO05D008735 9.4e-39 166.4 495 54.9
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 2.4e-34 151.8 262 34.4
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 1.2e-33 149.4 236 36.4
Hund27367 Selenicereus undatus HOM05D006877 ORTHO05D008735 2.5e-31 141.7 262 34.4
Zm00001eb378980 Zea mays HOM05D006877 ORTHO05D008735 7.5e-28 130.2 256 34.8
AUR62028175 Chenopodium quinoa HOM05D006877 ORTHO05D008735 3.5e-25 121.3 69 79.7
vmacro22171 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 1.0e-24 119.8 368 27.4
AUR62002061 Chenopodium quinoa HOM05D006877 ORTHO05D008735 1.3e-24 119.4 532 49.8
Os06g0111300 Oryza sativa ssp. japonica HOM05D006877 ORTHO05D008735 1.1e-23 116.3 81 66.7
SEGI_02928 Sequoiadendron giganteum HOM05D006877 ORTHO05D008735 9.5e-23 113.2 531 47.1
CDE06G2178 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 4.0e-21 107.8 126 42.9
Cc01_g05460 Coffea canephora HOM05D006877 ORTHO05D008735 4.1e-18 97.8 83 56.6
AagrBONN_evm.TU.Sc2ySwM_362.1641 Anthoceros agrestis HOM05D006877 ORTHO05D008735 4.3e-15 87.8 237 24.5
COL.COLO4_05229 Corchorus olitorius HOM05D006877 ORTHO05D008735 3.2e-10 71.6 59 59.3
MELO3C016924.2 Cucumis melo HOM05D000001 ORTHO05D004044 3.0e-08 65.1 300 21.0
Mapoly0001s0556 Marchantia polymorpha HOM05D006877 ORTHO05D008735 1.1e-07 63.2 89 36.0
Pp3c17_13520 Physcomitrium patens HOM05D006877 ORTHO05D008735 4.3e-07 61.2 56 51.8
TPR.G15324 Trifolium pratense HOM05D006258 ORTHO05D007961 1.2e-06 59.7 111 27.9
Lsat_1_v5_gn_3_92341 Lactuca sativa HOM05D000001 ORTHO05D009272 2.1e-06 58.9 308 25.0
Sopen12g032510 Solanum pennellii HOM05D000001 ORTHO05D000003 4.7e-06 57.8 287 20.6
AagrBONN_evm.TU.Sc2ySwM_228.5137__5138 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.2e-06 57.4 305 23.3
AagrBONN_evm.TU.Sc2ySwM_344.5344 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.2e-06 57.4 319 22.3
AagrBONN_evm.TU.Sc2ySwM_228.1187 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.0e-06 57.0 311 22.2
FvH4_3g28010 Fragaria vesca HOM05D000001 ORTHO05D000003 8.0e-06 57.0 297 18.2
FAN11G1860 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.0e-06 57.0 297 18.2
FAN21G2622 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.0e-06 57.0 297 18.9


User provided reference genes

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