Gene: AT5G26880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G26880
  • Transcript Identifier AT5G26880.1
  • Gene Type Coding gene
  • Location Chr5 : 9457950-9459190 : negative

Gene Family Information

  • ID HOM05D006647
  • #Genes/#Species 121/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G26880.1
  • symbol AGL26
  • full_name AGAMOUS-like 26
  • uniprot Q6NPL4

Descriptions

  • Description tRNA (cytidine(34)-2'-O)-methyltransferase
  • Computational description AGAMOUS-like 26 (AGL26); FUNCTIONS IN: RNA binding, sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, RNA methyltransferase activity; INVOLVED IN: regulation of transcription, DNA-dependent, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA/rRNA methyltransferase, SpoU (InterPro:IPR001537), Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 89 (TAIR:AT5G27580.1); Has 6012 Blast hits to 6012 proteins in 2123 species: Archae - 0; Bacteria - 4418; Metazoa - 4; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1549 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006995
IEP
Gene Ontologycellular response to nitrogen starvation1
GO:0002132
IBA
Gene Ontologywobble position uridine ribose methylation2
GO:0002131
IBA
Gene Ontologywobble position cytosine ribose methylation2
GO:0032259
IEA
GOA Databasemethylation
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0001510
IEA
GOA DatabaseRNA methylation
GO:0001510
IEA
InterProRNA methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0008173
IEA
Gene OntologyRNA methyltransferase activity
GO:0008173
IEA
InterProRNA methyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001537 tRNA/rRNA methyltransferase, SpoU type
IPR029028 Alpha/beta knot methyltransferases
IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase
IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal
Mapman id Description
35.1 not assigned.annotated