Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.4e-150 536.2 264 100.0
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 7.4e-131 470.7 267 90.3
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 2.3e-124 449.1 267 85.0
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.5e-118 429.1 267 83.1
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 7.9e-117 424.1 272 82.0
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 7.9e-117 424.1 272 82.0
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 5.7e-115 417.9 274 81.0
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 5.9e-112 407.9 265 81.9
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 5.5e-110 401.4 243 83.1
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 3.6e-109 398.7 257 81.3
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 3.6e-109 398.7 257 81.7
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 7.9e-109 397.5 257 81.7
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 2.9e-103 379.0 268 71.6
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 4.5e-96 355.1 262 67.9
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 1.1e-94 350.5 260 68.1
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 1.8e-92 343.2 253 69.2
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 2.6e-91 339.3 266 64.3
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.4e-91 339.0 266 64.7
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 3.4e-91 339.0 207 74.9
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 9.8e-91 337.4 211 74.9
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 9.8e-91 337.4 256 65.6
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 1.7e-90 336.7 247 68.8
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 2.8e-90 335.9 208 75.5
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 4.8e-90 335.1 257 63.8
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 6.3e-90 334.7 268 63.8
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 8.3e-90 334.3 253 66.8
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 1.4e-89 333.6 262 63.4
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.8e-89 333.2 260 63.8
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 3.1e-89 332.4 264 65.2
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 3.1e-89 332.4 258 65.1
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.4e-89 331.6 211 72.0
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 5.4e-89 331.6 211 72.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 7.0e-89 331.3 259 64.5
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 7.0e-89 331.3 207 75.4
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 9.1e-89 330.9 223 70.9
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 9.1e-89 330.9 264 64.4
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 2.0e-88 329.7 212 74.1
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 2.7e-88 329.3 255 67.1
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 1.3e-87 327.0 254 65.7
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 1.7e-87 326.6 203 74.9
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 2.2e-87 326.2 269 61.0
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 3.8e-87 325.5 240 67.1
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 6.5e-87 324.7 259 64.5
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 6.5e-87 324.7 261 64.0
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 8.5e-87 324.3 268 61.9
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 5.5e-86 321.6 262 61.8
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 6.1e-85 318.2 209 70.8
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 6.1e-85 318.2 236 66.5
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 8.0e-85 317.8 250 64.4
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 1.8e-84 316.6 268 60.8
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 4.0e-84 315.5 200 71.5
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 6.8e-84 314.7 264 60.2
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.2e-83 313.9 250 64.0
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 2.0e-83 313.2 200 73.0
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 3.4e-83 312.4 210 71.4
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 4.4e-83 312.0 270 62.2
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 5.7e-83 311.6 230 67.0
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 1.3e-82 310.5 210 80.0
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.2e-82 309.7 265 60.8
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 4.9e-82 308.5 248 62.9
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 8.3e-82 307.8 260 62.3
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 1.1e-81 307.4 250 62.4
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.4e-81 307.0 241 63.9
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.4e-81 307.0 250 63.2
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.4e-81 307.0 209 68.9
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 4.1e-81 305.4 241 63.9
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 7.0e-81 304.7 188 75.5
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 2.0e-80 303.1 250 63.6
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.0e-80 303.1 250 63.6
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 5.9e-80 301.6 226 64.6
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 2.3e-79 299.7 264 59.8
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.9e-78 296.6 277 56.0
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 7.3e-78 294.7 197 69.0
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 1.2e-77 293.9 188 72.9
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 4.7e-77 292.0 197 71.1
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.6e-75 286.2 206 68.4
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 4.4e-75 285.4 201 68.2
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 9.8e-75 284.3 175 73.7
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 4.9e-74 282.0 254 58.7
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 4.9e-74 282.0 176 74.4
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 7.0e-73 278.1 213 63.8
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 5.9e-72 275.0 174 74.1
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.3e-71 273.1 185 68.6
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 6.8e-68 261.5 337 45.4
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 9.2e-65 251.1 209 61.2
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.6e-64 250.4 254 54.3
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 4.6e-64 248.8 199 58.8
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 7.8e-64 248.1 154 73.4
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.1e-62 244.2 205 58.0
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.2e-61 240.7 176 66.5
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 4.4e-59 232.3 209 55.0
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 6.4e-58 228.4 159 66.0
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 2.3e-55 219.9 134 72.4
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 8.6e-55 218.0 211 55.0
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 1.9e-54 216.9 165 59.4
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 5.6e-54 215.3 157 63.1
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 2.8e-53 213.0 157 65.0
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 2.8e-53 213.0 237 51.1
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 1.7e-47 193.7 216 52.3
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 3.9e-47 192.6 107 85.0
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 3.9e-47 192.6 107 85.0
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-46 190.7 173 59.5
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 7.3e-46 188.3 161 60.2
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.6e-45 187.2 159 62.3
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 5.2e-44 182.2 111 76.6
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 1.5e-43 180.6 110 78.2
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 2.0e-43 180.3 112 74.1
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 2.9e-42 176.4 106 82.1
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 4.9e-42 175.6 177 55.4
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 6.4e-42 175.3 184 51.6
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.1e-38 164.5 224 43.8
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 8.1e-37 158.3 143 55.9
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-35 154.1 93 76.3
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 8.4e-34 148.3 81 80.2
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 7.1e-33 145.2 155 55.5
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 1.6e-32 144.1 82 76.8
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 4.6e-32 142.5 93 67.7
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 9.6e-30 134.8 126 58.7
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.1e-20 104.8 80 62.5
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 7.6e-19 98.6 178 36.5


User provided reference genes

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