Gene: AT5G22110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G22110
- Transcript Identifier AT5G22110.1
- Gene Type Coding gene
- Location Chr5 : 7331071-7334178 : negative
Gene Family Information
- ID HOM05D006175
- #Genes/#Species 128/95
- Phylogenetic origin
- ID ORTHO05D008081
- #Genes/#Species 123/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G22110.1
- symbol DPB2
- Alias ATDPB2,DNA polymerase epsilon subunit B2,CYL2,CYCLOPS 2
- uniprot Q500V9
Descriptions
- Description DNA polymerase epsilon subunit B2
- Computational description DNA polymerase epsilon subunit B2 (DPB2); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: DNA replication, DNA-dependent DNA replication; LOCATED IN: epsilon DNA polymerase complex, nucleus; EXPRESSED IN: embryo, male gametophyte, apical meristem, female gametophyte; CONTAINS InterPro DOMAIN/s: DNA polymerase epsilon, subunit B (InterPro:IPR016266), DNA polymerase alpha/epsilon, subunit B (InterPro:IPR007185); Has 412 Blast hits to 394 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 144; Plants - 62; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0006261 | IBA IEA | Gene Ontology | DNA-dependent DNA replication | 1 |
| GO:0006261 | IEA | InterPro | DNA-dependent DNA replication | |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0042276 | IBA | Gene Ontology | error-prone translesion synthesis | 1 |
| GO:0051781 | IMP | Gene Ontology | positive regulation of cell division | 2 |
| GO:0009793 | IMP | Gene Ontology | embryo development ending in seed dormancy | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0070182 | IPI | Gene Ontology | DNA polymerase binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0008622 | IEA | GOA Database | epsilon DNA polymerase complex | |
| GO:0008622 | IPI IBA | Gene Ontology | epsilon DNA polymerase complex | 1 2 |
| GO:0008622 | IEA | InterPro | epsilon DNA polymerase complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.2.3.3.2 | Cell cycle organisation.DNA replication.elongation.DNA polymerase epsilon complex.non-catalytic component Dpb2 |