Gene: AT5G20900
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G20900
- Transcript Identifier AT5G20900.1
- Gene Type Coding gene
- Location Chr5 : 7090883-7092201 : positive
Gene Family Information
- ID HOM05D001047
- #Genes/#Species 579/92
- Phylogenetic origin
- ID ORTHO05D000768
- #Genes/#Species 621/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G20900.1
- symbol JAZ12
- Alias TIFY3B
- uniprot Q9C5K8
Descriptions
- Description jasmonate-zim-domain protein 12
- Computational description jasmonate-zim-domain protein 12 (JAZ12); FUNCTIONS IN: protein binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399), CCT domain-like (InterPro:IPR018467); BEST Arabidopsis thaliana protein match is: jasmonate-zim-domain protein 11 (TAIR:AT3G43440.2); Has 425 Blast hits to 418 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 423; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:2000022 | IBA | Gene Ontology | regulation of jasmonic acid mediated signaling pathway | 1 |
| GO:0009611 | IBA | Gene Ontology | response to wounding | 1 |
| GO:0031347 | IBA | Gene Ontology | regulation of defense response | 1 |
| GO:0006952 | IEA | GOA Database | defense response | |
| GO:0010582 | ISO | PLAZA Integrative Orthology | floral meristem determinacy | Os04g0653000 |
| GO:0048449 | ISO | PLAZA Integrative Orthology | floral organ formation | Os04g0653000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.43 | RNA biosynthesis.transcriptional regulation.transcription factor (TIFY) |