Gene: AT5G20000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G20000
  • Transcript Identifier AT5G20000.1
  • Gene Type Coding gene
  • Location Chr5 : 6756915-6759550 : positive

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G20000.1
  • uniprot Q94BQ2

Descriptions

  • Description AAA-type ATPase family protein
  • Computational description AAA-type ATPase family protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle triple-A ATPase 6A (TAIR:AT5G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030163
IEA
Gene Ontologyprotein catabolic process
GO:0030163
IEA
InterProprotein catabolic process
GO:1901800
IEA
GOA Databasepositive regulation of proteasomal protein catabolic process
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0036402
IBA
IEA
Gene Ontologyproteasome-activating activity1
GO:0036402
IEA
InterProproteasome-activating activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0000502
IDA
Gene Ontologyproteasome complex2
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
TAS
Gene Ontologynucleus3
GO:0008540
IBA
Gene Ontologyproteasome regulatory particle, base subcomplex1
GO:0009536
HDA
Gene Ontologyplastid4
GO:0005829
RCA
Gene Ontologycytosol5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005937 26S proteasome regulatory subunit P45-like
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR035261 26S proteasome regulatory subunit 8
IPR003959 ATPase, AAA-type, core
IPR032501 Proteasomal ATPase OB C-terminal domain
IPR003593 AAA+ ATPase domain
IPR041569 AAA ATPase, AAA+ lid domain
Mapman id Description
19.2.5.2.1.6 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT6