Gene: AT5G19780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G19780
  • Transcript Identifier AT5G19780.1
  • Gene Type Coding gene
  • Location Chr5 : 6687212-6688926 : positive

Gene Family Information

  • ID HOM05D000349
  • #Genes/#Species 1356/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G19780.1
  • symbol TUA5
  • uniprot B9DHQ0

Descriptions

  • Description tubulin alpha-5
  • Computational description tubulin alpha-5 (TUA5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cadmium ion, microtubule-based process; LOCATED IN: tubulin complex, cytosol, cell wall, membrane; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-3 (TAIR:AT5G19770.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007017
IEA
GOA Databasemicrotubule-based process
GO:0007017
TAS
Gene Ontologymicrotubule-based process1
GO:0007017
IEA
InterPromicrotubule-based process
GO:0071258
ISO
PLAZA Integrative Orthologycellular response to gravity AT5G19770
GO:0000278
IBA
GOA Databasemitotic cell cycle
GO:0000226
IBA
GOA Databasemicrotubule cytoskeleton organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IBA
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0005200
IBA
IEA
GOA Databasestructural constituent of cytoskeleton
GO:0005200
ISS
Gene Ontologystructural constituent of cytoskeleton1
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IBA
IEA
GOA Databasemicrotubule
GO:0005874
IEA
InterPromicrotubule
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0009536
HDA
Gene Ontologyplastid2
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005829
RCA
Gene Ontologycytosol4
GO:0009505
HDA
Gene Ontologyplant-type cell wall5
GO:0045298
ISS
Gene Ontologytubulin complex1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023123 Tubulin, C-terminal
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR002452 Alpha tubulin
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR000217 Tubulin
IPR003008 Tubulin/FtsZ, GTPase domain
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.1.1 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component alpha-Tubulin