Gene: AT5G13030
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G13030
- Transcript Identifier AT5G13030.1
- Gene Type Coding gene
- Location Chr5 : 4133216-4136461 : positive
Gene Family Information
- ID HOM05D004119
- #Genes/#Species 171/99
- Phylogenetic origin
- ID ORTHO05D004797
- #Genes/#Species 171/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G13030.1
- uniprot Q8H126
Descriptions
- Description selenoprotein O
- Computational description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | IMP | Gene Ontology | response to water deprivation | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | IDA, HDA ISM | Gene Ontology | chloroplast | 1 2 |
| GO:0009570 | IDA | GOA Database | chloroplast stroma | |
| GO:0009570 | HDA | Gene Ontology | chloroplast stroma | 3 |
| GO:0005829 | HDA RCA | Gene Ontology | cytosol | 4 5 |
| GO:0009536 | HDA | Gene Ontology | plastid | 6 |
| GO:0009534 | IDA | Gene Ontology | chloroplast thylakoid | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003846 | Protein adenylyltransferase SelO |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |