Gene: AT5G12920

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G12920
  • Transcript Identifier AT5G12920.6
  • Gene Type Coding gene
  • Location Chr5 : 4077917-4082585 : negative

Gene Family Information

  • ID HOM05D006389
  • #Genes/#Species 125/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G12920.6
  • uniprot F4K108

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Computational description Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943); Has 51 Blast hits to 51 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0080008
ISS
Gene OntologyCul4-RING E3 ubiquitin ligase complex1
GO:0030687
IBA
Gene Ontologypreribosome, large subunit precursor2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated