Gene: AT5G12910

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G12910
  • Transcript Identifier AT5G12910.1
  • Gene Type Coding gene
  • Location Chr5 : 4077162-4077557 : positive

Gene Family Information

  • ID HOM05D000288
  • #Genes/#Species 1531/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G12910.1
  • uniprot Q9LXU8

Descriptions

  • Description Histone superfamily protein
  • Computational description Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: shoot apex, root, inflorescence, flower, leaf; EXPRESSED DURING: seedling growth, LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005694
IEA
GOA Databasechromosome
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000164 Histone H3/CENP-A
IPR009072 Histone-fold
IPR007125 Histone H2A/H2B/H3
Mapman id Description
12.1.1.3 Chromatin organisation.chromatin structure.DNA wrapping.histone (H3)