Gene: AT5G11380

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11380
  • Transcript Identifier AT5G11380.1
  • Gene Type Coding gene
  • Location Chr5 : 3630172-3633250 : positive

Gene Family Information

  • ID HOM05D001154
  • #Genes/#Species 535/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11380.1
  • symbol DXPS3
  • Alias DXS3,1-deoxy-D-xylulose 5-phosphate (DXP) synthase 3
  • uniprot Q9LFL9

Descriptions

  • Description 1-deoxy-D-xylulose 5-phosphate synthase 3
  • Computational description 1-deoxy-D-xylulose 5-phosphate synthase 3 (DXPS3); FUNCTIONS IN: 1-deoxy-D-xylulose-5-phosphate synthase activity; INVOLVED IN: metabolic process, terpenoid biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Deoxyxylulose-5-phosphate synthase (InterPro:IPR005477), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: Deoxyxylulose-5-phosphate synthase (TAIR:AT4G15560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016114
IEA
Gene Ontologyterpenoid biosynthetic process
GO:0016114
IEA
InterProterpenoid biosynthetic process
GO:0052865
IEA
Gene Ontology1-deoxy-D-xylulose 5-phosphate biosynthetic process
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process
GO:0009228
IEA
GOA Databasethiamine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008661
TAS, IEA
Gene Ontology1-deoxy-D-xylulose-5-phosphate synthase activity1
GO:0008661
IEA
InterPro1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0016744
IBA
Gene Ontologytransketolase or transaldolase activity2
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005477 Deoxyxylulose-5-phosphate synthase
IPR005475 Transketolase-like, pyrimidine-binding domain
IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
IPR029061 Thiamin diphosphate-binding fold
IPR033248 Transketolase, C-terminal domain
Mapman id Description
9.1.2.2 Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.1-deoxy-D-xylulose 5-phosphate synthase (DXS)