Gene: AT5G11030
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G11030
- Transcript Identifier AT5G11030.2
- Gene Type Coding gene
- Location Chr5 : 3490993-3495150 : negative
Gene Family Information
- ID HOM05D006351
- #Genes/#Species 125/94
- Phylogenetic origin
- ID ORTHO05D007796
- #Genes/#Species 126/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G11030.2
- symbol ALF4
- full_name ABERRANT LATERAL ROOT FORMATION 4
- uniprot Q84VX3
Descriptions
- Description aberrant root formation protein
- Computational description ABERRANT LATERAL ROOT FORMATION 4 (ALF4); CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, YAP/Alf4/glomulin (InterPro:IPR013877); Has 56 Blast hits to 55 proteins in 23 species: Archae - 0; Bacteria - 12; Metazoa - 4; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
- Computational description ABERRANT LATERAL ROOT FORMATION 4 (ALF4); INVOLVED IN: lateral root morphogenesis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, YAP/Alf4/glomulin (InterPro:IPR013877); Has 23 Blast hits to 23 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990110 | IMP | Gene Ontology | callus formation | 1 |
| GO:0031397 | IEA | GOA Database | negative regulation of protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0055105 | IBA | Gene Ontology | ubiquitin-protein transferase inhibitor activity | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 4 |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005737 | IDA IBA | Gene Ontology | cytoplasm | 3 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |