Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 0.0e+00 1209.9 627 100.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 9.5e-294 1013.1 590 90.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 2.9e-274 948.3 593 83.6
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 5.1e-255 884.4 595 79.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.2e-232 810.1 616 71.8
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 4.8e-229 798.1 498 82.9
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 5.3e-212 741.5 607 68.5
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 5.9e-211 738.0 593 69.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.2e-209 731.9 609 67.7
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 9.4e-209 730.7 606 66.8
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.7e-202 709.9 618 64.4
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 1.2e-200 703.7 603 64.8
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.2e-190 670.6 609 63.5
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.3e-149 534.3 628 49.2
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 5.3e-143 512.3 620 48.1
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 4.4e-142 509.2 602 47.2
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.2e-141 506.9 601 48.6
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 6.4e-141 505.4 599 48.1
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 5.4e-140 502.3 595 48.6
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.5e-137 494.2 606 47.2
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.5e-137 493.4 601 48.4
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 4.3e-137 492.7 595 48.7
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 7.3e-137 491.9 609 47.8
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.8e-136 490.0 618 47.7
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 3.6e-136 489.6 597 47.4
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.8e-135 487.3 619 45.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.9e-133 479.9 583 47.3
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 3.8e-133 479.6 600 46.2
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.6e-131 474.2 598 46.8
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.1e-131 473.8 598 47.7
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 2.7e-131 473.4 602 45.5
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.7e-131 473.4 620 45.2
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.8e-130 470.7 666 44.7
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 3.9e-130 469.5 609 44.8
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 5.1e-130 469.2 571 48.2
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 6.7e-130 468.8 643 43.7
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 6.7e-130 468.8 600 46.3
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 8.7e-130 468.4 596 47.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.1e-129 468.0 602 45.3
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.9e-129 467.2 640 44.1
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 3.3e-129 466.5 643 43.4
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 3.3e-129 466.5 617 45.4
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 9.6e-129 464.9 596 45.1
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-128 464.5 622 46.8
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.7e-128 463.0 643 43.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.4e-127 460.3 622 46.0
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.1e-127 459.9 573 46.9
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 3.1e-127 459.9 605 44.6
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 9.0e-127 458.4 582 46.4
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.0e-126 457.2 601 44.4
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 2.6e-126 456.8 603 45.1
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 5.8e-126 455.7 596 44.1
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 5.8e-126 455.7 600 45.3
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 5.8e-126 455.7 602 44.7
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 7.6e-126 455.3 602 44.4
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 3.8e-125 453.0 609 44.3
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.9e-124 450.7 615 45.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 3.2e-124 449.9 649 43.6
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.7e-123 446.8 652 42.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.0e-123 445.7 555 46.5
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 5.7e-121 439.1 605 44.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.4e-119 433.7 611 42.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.9e-117 426.8 572 45.1
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 3.2e-116 423.3 599 43.2
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.2e-115 421.4 613 40.5
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.3e-114 417.2 643 41.1
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 3.9e-114 416.4 602 42.9
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.5e-113 414.5 656 39.0
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.9e-113 414.1 607 40.7
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 3.3e-113 413.3 617 42.5
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 6.3e-112 409.1 650 39.7
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.4e-111 407.1 606 42.4
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 5.3e-111 406.0 604 41.9
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.6e-110 403.7 542 45.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 5.9e-110 402.5 613 42.6
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 1.0e-109 401.7 606 40.9
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.1e-108 398.3 569 42.5
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.1e-107 394.0 630 39.0
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 3.3e-105 386.7 514 43.8
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 5.7e-105 386.0 491 45.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 3.0e-98 363.6 525 40.4
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 6.7e-98 362.5 615 37.4
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.6e-97 360.5 632 37.5
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.6e-94 350.5 484 45.0
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.6e-94 350.5 617 37.3
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.8e-87 327.8 403 44.7
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 7.0e-87 325.9 576 38.4
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.0e-85 322.0 410 44.6
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.0e-85 319.7 384 48.2
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.1e-83 312.8 385 47.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-78 298.5 385 46.2
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 6.5e-77 292.7 622 35.0
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 4.2e-76 290.0 376 42.8
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 8.8e-74 282.3 639 34.0
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.3e-68 263.8 372 44.1
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.6e-67 260.4 452 37.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 5.4e-63 246.5 612 30.9
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 7.8e-62 242.7 340 44.4
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-60 238.4 586 31.9
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.0e-54 218.0 293 43.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.2e-49 202.2 261 46.4
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 5.1e-45 186.8 458 31.0
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 2.7e-38 164.5 257 38.1
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 8.1e-35 152.9 499 27.9
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 5.2e-34 150.2 227 39.6
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 7.6e-33 146.4 162 48.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 5.4e-31 140.2 572 24.1
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.6e-30 138.7 564 24.6
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 2.1e-30 138.3 555 26.3
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.0e-29 136.0 596 24.7
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.8e-24 117.5 139 45.3
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.4e-17 94.4 96 55.2
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.7e-16 92.0 180 37.8
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 1.1e-15 89.4 129 42.6
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 1.3e-11 75.9 110 40.0
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.1e-07 62.8 259 25.5


User provided reference genes

Program Settings