Gene: AT5G08680
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G08680
- Transcript Identifier AT5G08680.1
- Gene Type Coding gene
- Location Chr5 : 2821992-2824683 : positive
Gene Family Information
- ID HOM05D000680
- #Genes/#Species 840/100
- Phylogenetic origin
- ID ORTHO05D000738
- #Genes/#Species 644/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G08680.1
- uniprot Q9C5A9
Descriptions
- Description ATP synthase alpha/beta family protein
- Computational description ATP synthase alpha/beta family protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, copper ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1); EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, F1 complex, beta subunit (InterPro:IPR005722), ATP synthase, F1 beta subunit (InterPro:IPR020971), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR018118), ATPase, AAA type, core (InterPro:IPR003593), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194); BEST Arabidopsis thaliana protein match is: ATP synthase alpha/beta family protein (TAIR:AT5G08670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006754 | IEA | GOA Database | ATP biosynthetic process | |
| GO:0006754 | IEA | InterPro | ATP biosynthetic process | |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:1902600 | IEA | GOA Database | proton transmembrane transport | |
| GO:1902600 | IEA | InterPro | proton transmembrane transport | |
| GO:0046034 | IEA | GOA Database | ATP metabolic process | |
| GO:0046034 | IEA | InterPro | ATP metabolic process | |
| GO:0015986 | IEA | GOA Database | ATP synthesis coupled proton transport | |
| GO:0015986 | IEA | InterPro | ATP synthesis coupled proton transport | |
| GO:0042776 | IBA | Gene Ontology | mitochondrial ATP synthesis coupled proton transport | 1 |
| GO:0046686 | IEP | GOA Database | response to cadmium ion |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0046933 | IEA | GOA Database | proton-transporting ATP synthase activity, rotational mechanism | |
| GO:0046933 | IBA | Gene Ontology | proton-transporting ATP synthase activity, rotational mechanism | 1 |
| GO:0046933 | IEA | InterPro | proton-transporting ATP synthase activity, rotational mechanism | |
| GO:0046961 | IEA | Gene Ontology | proton-transporting ATPase activity, rotational mechanism | |
| GO:0005507 | HDA | Gene Ontology | copper ion binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0000275 | IEA | GOA Database | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) | |
| GO:0000275 | IDA | Gene Ontology | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) | 3 |
| GO:0000275 | IEA | InterPro | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) | |
| GO:0045261 | IEA | GOA Database | proton-transporting ATP synthase complex, catalytic core F(1) | |
| GO:0045261 | IBA | Gene Ontology | proton-transporting ATP synthase complex, catalytic core F(1) | 1 |
| GO:0045261 | IEA | InterPro | proton-transporting ATP synthase complex, catalytic core F(1) | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | IDA, HDA ISM | Gene Ontology | mitochondrion | 3 4 |
| GO:0005753 | IDA | GOA Database | mitochondrial proton-transporting ATP synthase complex | |
| GO:0005753 | HDA IBA | Gene Ontology | mitochondrial proton-transporting ATP synthase complex | 1 5 |
| GO:0005829 | RCA | Gene Ontology | cytosol | 6 |
| GO:0005794 | RCA | Gene Ontology | Golgi apparatus | 7 |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 8 |
| GO:0005743 | IEA | GOA Database | mitochondrial inner membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR020971 | ATP synthase, F1 beta subunit |
| IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
| IPR042079 | ATP synthase, F1 beta subunit superfamily |
| IPR024034 | ATPase, F1/V1 complex, beta/alpha subunit, C-terminal |
| IPR005722 | ATP synthase, F1 complex, beta subunit |
| Mapman id | Description |
|---|---|
| 2.4.6.2.2 | Cellular respiration.oxidative phosphorylation.ATP synthase complex.peripheral MF1 subcomplex.subunit beta |