Gene: AT5G05560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G05560
  • Transcript Identifier AT5G05560.2
  • Gene Type Coding gene
  • Location Chr5 : 1641452-1654685 : positive

Gene Family Information

  • ID HOM05D003492
  • #Genes/#Species 195/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G05560.2
  • symbol EMB2771
  • Alias APC1,anaphase promoting complex 1
  • full_name EMBRYO DEFECTIVE 2771
  • uniprot Q9FFF9

Descriptions

  • Description E3 ubiquitin ligase
  • Computational description EMBRYO DEFECTIVE 2771 (EMB2771); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0031145
IBA
Gene Ontologyanaphase-promoting complex-dependent catabolic process1
GO:0007091
IBA
Gene Ontologymetaphase/anaphase transition of mitotic cell cycle1
GO:0070979
IBA
Gene Ontologyprotein K11-linked ubiquitination1
GO:0048481
IMP
Gene Ontologyplant ovule development2
GO:0010252
IMP
Gene Ontologyauxin homeostasis2
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy2
GO:0009553
IMP
Gene Ontologyembryo sac development2
GO:0006511
TAS
Gene Ontologyubiquitin-dependent protein catabolic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060090
IBA
Gene Ontologymolecular adaptor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005680
IBA
IEA
Gene Ontologyanaphase-promoting complex1
GO:0005680
IEA
InterProanaphase-promoting complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0000151
TAS
Gene Ontologyubiquitin ligase complex3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR024990 Anaphase-promoting complex subunit 1
IPR041221 Anaphase-promoting complex subunit 1, C-terminal
Mapman id Description
13.3.3.1.1.1.1 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin protein ligase complex.platform subcomplex.component APC1