Gene: AT5G05550
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G05550
- Transcript Identifier AT5G05550.1
- Gene Type Coding gene
- Location Chr5 : 1639344-1640550 : negative
Gene Family Information
- ID HOM05D000815
- #Genes/#Species 726/96
- Phylogenetic origin
- ID ORTHO05D000636
- #Genes/#Species 722/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G05550.1
- uniprot Q9FFG0
Descriptions
- Description sequence-specific DNA binding transcription factor
- Computational description sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT3G11100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0000976 | IBA | Gene Ontology | transcription cis-regulatory region binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 3 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.20 | RNA biosynthesis.transcriptional regulation.transcription factor (Trihelix) |